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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 319.2
Min RPKM: 18.6
Std RPKM: 57.9
Median RPKM: 141.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
319.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
294.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
273.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
247.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
247.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
210.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
209.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
209.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
207.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
207.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
202.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
202.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
201.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
200.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
198.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
198.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
196.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
195.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
195.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
194.4
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
193.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
190.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
190.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
186.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
185.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
182.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
180.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
179.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
179.6
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
178.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
175.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
174.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
174.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
173.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
169.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
169.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
168.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
167.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
167.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
167.4
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
165.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
164.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
164.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
161.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
159.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
157.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
155.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
153.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
151.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
151.6
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
150.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
149.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
149.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
148.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
147.1
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
146.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
144.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
142.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
141.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
138.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
138.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
137.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
137.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
136.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
134.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
134.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
132.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
131.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
130.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
130.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
128.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
126.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
125.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
124.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
124.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
122.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
120.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
120.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
116.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
115.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
114.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
111.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
109.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
106.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
105.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
103.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
100.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
98.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
97.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
91.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
89.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
83.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
82.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
80.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
79.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
77.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
76.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
74.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
71.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
70.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
67.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
65.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
64.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
62.8
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
61.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
56.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
55.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
54.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
49.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
45.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
45.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
37.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
36.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
34.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
30.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
19.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
18.6
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.