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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1065.9
Min RPKM: 448.5
Std RPKM: 138.5
Median RPKM: 688.0
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
1065.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
1049.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
1046.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
1044.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
994.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
982.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
955.6
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
920.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
908.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
904.4
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
892.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
891.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
884.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
882.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
874.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
866.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
862.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
855.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
852.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
850.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
845.1
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
833.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
832.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
831.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
827.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
817.2
GTEX-R55G-0226-SM-48FEI
40-49 years, female
816.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
806.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
804.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
804.0
GTEX-144GN-2126-SM-5O99D
50-59 years, male
801.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
797.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
781.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
777.4
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
775.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
769.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
768.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
761.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
760.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
755.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
743.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
742.2
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
741.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
736.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
716.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
715.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
707.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
706.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
703.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
694.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
692.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
688.1
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
687.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
682.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
680.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
677.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
676.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
674.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
674.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
671.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
668.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
667.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
664.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
663.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
661.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
658.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
654.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
651.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
646.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
639.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
632.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
631.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
630.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
629.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
628.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
624.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
624.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
623.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
621.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
616.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
615.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
614.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
614.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
609.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
609.0
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
608.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
607.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
595.5
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
582.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
580.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
577.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
573.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
565.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
559.2
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
536.8
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
531.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
526.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
526.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
516.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
507.5
GTEX-Q734-0226-SM-48U1A
40-49 years, female
471.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
463.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
454.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
448.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.