We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 921.5
Min RPKM: 199.8
Std RPKM: 172.8
Median RPKM: 484.8
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
921.5
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
906.1
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
897.1
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
863.6
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
861.0
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
824.9
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
805.9
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
793.2
GTEX-13O61-1326-SM-5KM31
60-69 years, male
792.9
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
775.7
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
765.0
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
745.9
GTEX-1192X-2526-SM-59868
50-59 years, male
738.3
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
716.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
715.4
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
712.8
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
708.3
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
699.5
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
672.0
GTEX-117YX-0326-SM-5GICL
50-59 years, male
654.0
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
648.1
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
644.9
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
630.1
GTEX-13111-1426-SM-5DUW3
50-59 years, male
629.5
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
619.4
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
596.4
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
595.5
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
595.3
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
573.6
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
565.8
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
565.4
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
560.6
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
560.3
GTEX-13113-1226-SM-5EGHT
60-69 years, female
554.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
543.6
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
540.7
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
533.5
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
532.1
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
528.2
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
528.2
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
513.2
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
496.5
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
491.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
485.7
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
483.9
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
481.1
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
475.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
475.4
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
472.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
460.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
457.5
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
453.5
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
447.9
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
442.1
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
437.7
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
435.8
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
435.2
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
434.5
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
433.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
433.2
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
433.2
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
430.9
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
422.0
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
418.5
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
414.6
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
412.0
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
396.6
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
394.2
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
379.6
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
371.6
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
369.1
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
359.6
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
359.3
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
358.9
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
357.0
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
354.7
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
352.8
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
342.9
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
326.0
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
315.6
GTEX-ZTSS-0926-SM-59865
40-49 years, male
295.5
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
291.9
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
279.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
259.0
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
241.8
GTEX-1122O-1326-SM-5H11F
60-69 years, female
234.3
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
229.2
GTEX-111YS-1426-SM-5GID8
60-69 years, male
199.8
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.