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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2313.5
Min RPKM: 909.6
Std RPKM: 296.0
Median RPKM: 1441.9
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
2313.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
2279.5
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
2164.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
2150.8
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1971.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1953.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1913.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1902.8
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1901.2
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1900.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1889.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1853.6
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1842.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1818.7
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1788.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1786.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1786.3
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1780.5
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1776.3
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1767.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1749.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1730.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1712.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1706.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1685.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1646.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1644.4
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1635.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1599.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
1573.6
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1571.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1554.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1549.6
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1548.0
GTEX-11I78-1926-SM-59878
50-59 years, female
1545.1
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1539.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1539.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1537.0
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1536.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1533.2
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1505.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1503.4
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1499.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1482.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1470.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1459.7
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1455.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1454.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1441.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1428.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1422.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1414.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1405.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1404.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1402.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1402.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1389.9
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1388.1
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1388.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1385.2
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1381.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
1369.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1369.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1368.1
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1365.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1355.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1345.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1329.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
1319.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1303.6
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1303.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1277.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
1276.9
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1274.8
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1265.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1262.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1260.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1252.5
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1236.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1221.2
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1211.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
1177.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1168.5
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
1147.7
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1124.2
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1119.8
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1117.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1104.3
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1090.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
1073.2
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
1061.6
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1039.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
1035.2
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
1026.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
1004.8
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
953.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
909.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.