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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 408.0
Min RPKM: 90.1
Std RPKM: 52.7
Median RPKM: 190.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
408.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
331.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
328.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
285.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
284.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
284.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
274.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
270.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
270.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
270.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
265.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
260.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
258.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
257.7
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
256.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
251.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
251.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
249.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
243.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
239.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
238.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
237.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
235.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
233.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
229.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
229.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
227.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
224.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
222.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
221.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
218.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
218.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
218.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
217.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
216.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
215.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
214.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
210.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
208.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
208.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
206.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
205.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
204.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
203.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
202.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
202.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
202.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
201.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
199.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
195.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
194.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
194.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
194.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
193.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
193.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
192.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
192.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
191.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
190.4
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
187.6
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
186.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
184.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
181.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
181.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
180.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
179.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
179.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
178.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
178.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
176.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
174.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
173.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
173.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
172.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
171.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
171.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
169.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
169.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
169.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
168.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
168.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
166.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
165.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
163.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
163.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
158.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
158.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
157.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
155.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
152.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
152.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
152.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
151.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
146.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
146.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
144.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
143.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
143.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
140.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
137.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
136.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
136.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
136.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
135.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
131.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
127.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
125.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
123.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
122.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
118.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
118.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
117.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
114.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
103.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
96.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
93.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
90.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.