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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1668.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1236.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1339.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2518.8
Min RPKM: 349.5
Std RPKM: 244.8
Median RPKM: 647.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
2518.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1746.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1594.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1548.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1435.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1321.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1149.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1132.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1123.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1120.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1097.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1097.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1026.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1017.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1008.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
989.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
984.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
982.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
979.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
976.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
972.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
964.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
948.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
943.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
943.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
934.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
926.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
911.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
907.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
902.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
886.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
880.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
872.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
865.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
861.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
859.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
858.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
840.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
835.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
830.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
829.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
823.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
812.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
810.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
807.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
795.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
791.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
787.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
786.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
782.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
777.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
777.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
775.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
769.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
767.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
758.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
753.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
746.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
746.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
741.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
736.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
734.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
730.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
729.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
724.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
724.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
721.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
721.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
721.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
718.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
717.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
717.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
716.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
715.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
712.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
709.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
708.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
707.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
707.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
707.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
697.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
694.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
692.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
691.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
689.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
685.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
684.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
681.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
677.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
674.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
674.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
672.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
671.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
670.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
666.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
660.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
659.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
659.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
654.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
652.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
651.6
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
650.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
650.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
649.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
648.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
648.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
647.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
646.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
646.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
643.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
642.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
641.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
638.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
637.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
636.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
636.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
635.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
634.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
633.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
632.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
632.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
632.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
631.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
630.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
624.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
621.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
619.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
618.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
618.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
616.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
611.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
610.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
610.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
607.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
606.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
606.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
605.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
604.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
601.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
597.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
592.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
590.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
589.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
586.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
586.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
583.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
582.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
582.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
582.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
579.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
578.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
577.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
574.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
573.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
572.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
570.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
569.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
564.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
562.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
560.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
559.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
559.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
558.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
556.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
555.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
545.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
544.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
538.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
536.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
536.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
535.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
535.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
532.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
530.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
530.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
528.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
527.0
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
512.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
511.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
509.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
504.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
503.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
500.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
498.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
498.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
497.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
494.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
492.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
491.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
491.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
488.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
488.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
488.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
476.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
472.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
470.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
470.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
469.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
452.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
444.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
444.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
438.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
426.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
424.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
419.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
414.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
411.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
403.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
395.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
390.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
385.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
366.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
357.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
349.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.