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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 129.4
Min RPKM: 19.5
Std RPKM: 21.9
Median RPKM: 57.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
129.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
118.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
117.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
113.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
103.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
102.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
96.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
92.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
90.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
89.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
88.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
83.6
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
83.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
81.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
81.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
79.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
79.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
78.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
77.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
77.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
76.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
75.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
75.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
75.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
74.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
74.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
73.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
73.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
73.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
73.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
73.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
72.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
72.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
71.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
71.1
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
71.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
69.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
68.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
68.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
67.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
67.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
66.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
66.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
66.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
65.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
63.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
63.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
62.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
62.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
61.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
61.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
60.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
60.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
59.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
59.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
58.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
58.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
57.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
57.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
57.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
55.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
54.7
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
54.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
54.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
53.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
53.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
52.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
52.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
51.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
51.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
51.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
50.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
49.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
49.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
48.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
48.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
48.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
47.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
47.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
47.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
47.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
45.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
45.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
44.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
44.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
43.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
43.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
42.7
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
42.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
42.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
42.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
42.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
41.5
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
40.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
39.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
39.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
38.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
38.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
36.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
36.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
35.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
35.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
35.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
35.4
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
34.7
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
31.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
31.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
29.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
29.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
26.1
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
25.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
25.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
23.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
21.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
20.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
20.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
19.5
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.