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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 78.4
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 33.3
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 32.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 50.9
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 38.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 72.3
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 41.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 64.9
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 161.4
Min RPKM: 39.6
Std RPKM: 21.4
Median RPKM: 81.4
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
161.4
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
146.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
134.3
GTEX-RU72-1426-SM-46MUF
50-59 years, female
125.9
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
122.9
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
120.3
GTEX-S33H-1626-SM-4AD68
30-39 years, male
117.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
112.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
112.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
111.8
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
110.6
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
110.2
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
109.6
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
108.9
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
104.0
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
103.7
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
103.5
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
103.3
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
102.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
102.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
101.9
GTEX-11ZUS-2526-SM-59872
30-39 years, male
100.9
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
100.2
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
100.2
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
100.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
98.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
96.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
96.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
93.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
93.4
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
93.2
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
93.0
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
92.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
92.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
91.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
91.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
91.7
GTEX-YECK-1926-SM-4W21H
60-69 years, male
91.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
90.8
GTEX-RN64-1826-SM-48FDV
50-59 years, male
90.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
90.2
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
89.6
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
89.5
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
87.6
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
86.2
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
85.8
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
85.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
85.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
85.0
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
84.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
83.8
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
83.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
82.9
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
82.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
82.5
GTEX-Q734-0326-SM-48U15
40-49 years, female
82.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
81.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
81.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
81.5
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
81.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
81.3
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
80.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
80.6
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
80.3
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
79.3
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
78.7
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
78.7
GTEX-QEL4-1226-SM-447A4
50-59 years, male
78.3
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
77.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
77.1
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
76.6
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
76.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
76.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
75.9
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
75.0
GTEX-1399T-0826-SM-5IFES
60-69 years, male
74.6
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
74.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
74.1
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
73.6
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
73.2
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
72.7
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
72.2
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
71.8
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
69.7
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
69.3
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
69.2
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
69.1
GTEX-13112-1426-SM-5EGH8
50-59 years, male
68.8
GTEX-P78B-1326-SM-3P611
40-49 years, female
68.2
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
67.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
67.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
67.3
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
67.0
GTEX-11GSP-0626-SM-5986T
60-69 years, female
66.9
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
66.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
63.9
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
62.6
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
61.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
61.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
60.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
59.0
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
58.5
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
58.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
58.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
57.9
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
57.4
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
56.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
55.5
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
53.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
53.2
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
52.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
50.9
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
50.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
50.7
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
48.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
44.5
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
43.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
39.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
39.6
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
