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COLON - Expression summary
RNA expressioni
HPA:135.2TPM
GTEx:211.4RPKM
FANTOM5:378.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 135.2
overview Male, age 54 Sample 1
TPM: 163.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 117.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 97.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 223.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 67.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 173.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 99.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 99.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 146.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 146.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 130.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 178.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 115.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 211.4
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 261.7
Samples: 149

Max RPKM: 401.7
Min RPKM: 105.4
Std RPKM: 51.3
Median RPKM: 258.8
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 401.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 375.7
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 371.3
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 368.3
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 363.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 352.4
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 352.4
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 346.5
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 346.1
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 345.2
Show all
Colon - Transverse
RPKM: 173.2
Samples: 196

Max RPKM: 333.4
Min RPKM: 55.6
Std RPKM: 52.1
Median RPKM: 161.6
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 333.4
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 327.0
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 319.5
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 318.7
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 291.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 275.5
GTEX-11GSP-1626-SM-5986N 60-69 years, female 274.5
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 269.6
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 266.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 265.8
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 378.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 340.7
FF:10014-101C5 62,83,84 years, mixed 378.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.