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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 288.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 443.3
Min RPKM: 158.5
Std RPKM: 55.9
Median RPKM: 302.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
443.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
427.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
416.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
408.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
405.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
399.2
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
384.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
378.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
374.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
373.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
367.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
364.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
361.8
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
355.0
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
352.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
349.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
347.2
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
347.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
347.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
346.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
346.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
344.7
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
343.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
342.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
341.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
340.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
340.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
338.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
337.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
332.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
332.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
332.0
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
330.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
330.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
328.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
325.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
324.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
324.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
324.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
321.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
320.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
318.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
317.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
316.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
312.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
311.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
310.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
309.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
308.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
308.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
307.1
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
306.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
306.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
305.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
304.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
304.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
302.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
302.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
302.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
301.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
299.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
299.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
297.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
296.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
293.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
293.2
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
289.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
288.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
288.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
286.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
283.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
282.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
281.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
280.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
279.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
273.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
273.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
271.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
271.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
271.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
270.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
269.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
267.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
262.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
261.6
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
259.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
256.9
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
254.5
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
251.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
250.8
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
250.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
250.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
249.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
247.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
247.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
245.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
243.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
238.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
234.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
234.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
234.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
232.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
228.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
228.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
223.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
216.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
213.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
211.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
208.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
183.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
181.9
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
170.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
161.5
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
158.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 308.9
Samples: 108
Max RPKM: 504.3
Min RPKM: 116.8
Std RPKM: 74.3
Median RPKM: 319.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
504.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
473.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
440.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
431.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
427.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
417.2
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
416.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
410.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
397.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
393.4
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
392.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
392.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
388.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
387.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
386.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
384.2
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
381.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
379.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
377.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
374.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
372.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
372.2
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
371.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
368.1
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
366.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
366.9
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
365.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
365.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
364.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
363.4
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
362.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
352.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
351.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
346.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
346.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
345.1
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
345.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
343.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
343.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
342.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
340.2
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
337.3
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
334.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
331.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
330.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
329.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
329.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
327.8
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
326.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
326.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
326.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
324.2
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
324.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
320.5
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
318.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
312.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
312.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
311.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
310.1
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
305.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
302.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
302.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
301.9
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
298.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
295.4
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
294.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
294.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
292.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
290.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
287.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
286.7
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
285.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
284.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
281.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
276.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
275.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
271.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
264.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
261.5
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
259.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
253.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
252.5
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
249.2
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
248.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
242.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
239.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
238.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
236.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
234.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
232.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
225.1
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
224.0
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
223.3
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
217.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
216.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
215.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
210.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
209.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
200.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
188.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
187.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
184.8
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
172.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
170.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
166.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
159.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
153.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
116.8
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.