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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 429.9
Min RPKM: 61.0
Std RPKM: 74.0
Median RPKM: 235.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
429.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
407.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
388.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
370.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
351.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
341.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
341.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
335.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
321.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
320.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
318.0
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
315.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
314.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
310.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
310.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
309.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
302.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
292.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
291.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
288.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
287.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
286.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
283.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
282.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
281.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
281.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
281.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
280.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
279.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
278.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
277.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
276.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
275.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
274.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
274.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
270.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
264.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
261.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
258.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
252.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
251.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
251.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
249.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
248.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
247.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
246.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
245.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
244.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
244.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
244.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
242.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
242.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
240.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
240.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
238.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
238.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
237.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
236.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
235.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
232.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
225.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
221.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
221.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
219.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
218.9
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
218.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
214.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
212.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
212.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
212.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
210.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
207.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
205.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
201.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
201.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
196.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
195.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
195.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
195.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
194.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
193.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
188.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
184.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
183.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
180.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
180.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
175.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
174.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
167.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
165.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
165.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
159.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
157.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
155.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
154.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
152.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
151.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
150.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
148.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
144.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
143.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
141.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
138.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
129.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
123.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
118.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
112.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
112.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
111.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
108.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
103.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
102.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
94.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
87.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
83.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
67.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
61.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.