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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 260.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 208.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 137
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 374.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 438.9
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 335.5
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 255
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 223.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 259.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 410.4
Min RPKM: 52.7
Std RPKM: 79.0
Median RPKM: 205.5
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
410.4
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
389.5
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
381.4
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
377.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
371.9
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
367.8
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
360.2
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
354.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
349.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
336.1
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
322.8
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
319.2
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
318.8
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
317.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
314.7
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
311.0
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
306.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
305.6
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
303.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
301.4
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
300.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
299.0
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
297.8
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
290.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
288.8
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
288.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
288.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
286.9
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
284.4
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
282.7
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
282.7
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
282.3
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
282.3
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
281.4
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
280.0
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
279.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
274.7
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
273.7
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
271.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
269.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
269.1
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
267.2
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
266.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
266.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
264.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
259.9
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
257.5
GTEX-13112-0226-SM-5P9IV
50-59 years, male
256.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
254.5
GTEX-QLQW-1026-SM-447A9
30-39 years, male
251.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
250.4
GTEX-REY6-0126-SM-48FDT
60-69 years, male
250.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
248.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
246.2
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
245.6
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
242.8
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
241.5
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
240.1
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
239.9
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
238.3
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
237.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
235.1
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
234.3
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
232.6
GTEX-S95S-1126-SM-4B64E
60-69 years, male
231.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
231.4
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
230.0
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
226.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
225.7
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
225.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
222.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
222.9
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
221.7
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
220.6
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
219.5
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
218.4
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
215.6
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
213.6
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
211.7
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
211.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
210.5
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
209.9
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
208.7
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
207.9
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
207.9
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
205.9
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
205.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
201.5
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
200.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
200.3
GTEX-12696-0226-SM-5EGL3
60-69 years, male
197.1
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
195.0
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
194.5
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
194.4
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
194.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
193.8
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
191.5
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
190.9
GTEX-R55C-1426-SM-48FED
40-49 years, male
190.9
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
190.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
186.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
185.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
185.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
184.2
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
182.6
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
179.9
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
177.7
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
177.0
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
176.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
176.3
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
176.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
174.1
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
173.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
172.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
170.5
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
168.6
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
165.8
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
164.8
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
163.1
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
162.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
161.9
GTEX-X261-2326-SM-4PQYU
50-59 years, male
160.9
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
159.6
GTEX-13111-1526-SM-5EGJX
50-59 years, male
157.9
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
157.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
157.0
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
152.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
149.4
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
147.2
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
144.4
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
143.8
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
142.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
141.4
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
139.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
132.4
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
131.4
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
131.0
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
130.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
128.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
127.5
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
126.7
GTEX-XPT6-1626-SM-4B655
20-29 years, male
124.6
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
124.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
123.0
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
120.4
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
119.2
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
119.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
112.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
112.5
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
110.9
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
108.2
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
107.1
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
106.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
103.6
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
101.6
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
100.9
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
95.7
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
93.1
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
91.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
90.3
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
90.1
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
89.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
84.5
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
80.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
80.5
GTEX-S33H-0126-SM-4AD62
30-39 years, male
66.5
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
64.3
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
62.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
61.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
57.1
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
56.5
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
52.7
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.