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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 210.9
Min RPKM: 35.1
Std RPKM: 36.1
Median RPKM: 130.0
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
210.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
204.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
204.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
201.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
201.7
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
195.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
190.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
187.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
183.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
172.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
170.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
166.1
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
164.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
163.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
163.0
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
161.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
160.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
159.7
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
159.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
156.9
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
156.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
154.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
152.9
GTEX-QV31-0126-SM-447BP
30-39 years, male
152.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
152.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
151.9
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
151.7
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
151.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
150.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
147.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
146.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
145.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
144.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
144.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
143.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
143.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
142.3
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
141.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
140.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
140.4
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
140.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
139.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
139.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
139.1
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
138.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
138.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
137.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
136.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
133.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
132.7
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
131.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
130.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
129.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
127.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
126.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
124.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
124.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
124.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
124.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
123.3
GTEX-13111-0126-SM-5EGHO
50-59 years, male
123.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
122.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
121.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
121.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
119.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
118.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
117.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
116.5
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
115.9
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
112.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
110.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
110.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
109.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
109.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
108.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
108.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
107.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
106.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
103.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
103.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
102.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
100.2
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
95.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
95.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
92.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
90.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
90.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
90.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
87.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
86.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
83.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
83.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
82.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
78.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
78.4
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
76.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
69.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
68.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
66.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
65.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
63.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
59.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
59.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
35.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.