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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 159.2
Min RPKM: 12.9
Std RPKM: 28.4
Median RPKM: 72.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
159.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
153.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
144.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
130.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
119.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
117.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
115.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
111.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
107.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
103.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
103.4
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
102.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
102.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
100.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
99.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
99.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
99.1
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
95.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
94.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
94.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
92.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
91.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
89.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
88.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
88.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
87.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
87.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
86.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
85.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
84.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
84.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
82.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
81.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
81.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
81.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
80.3
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
79.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
79.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
78.7
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
78.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
78.1
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
77.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
76.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
75.0
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
73.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
73.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
72.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
72.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
72.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
71.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
71.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
70.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
69.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
69.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
68.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
67.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
67.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
66.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
66.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
65.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
64.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
64.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
63.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
63.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
62.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
62.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
61.1
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
60.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
60.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
58.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
56.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
54.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
54.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
52.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
49.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
49.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
48.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
48.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
47.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
46.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
43.1
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
42.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
38.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
35.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
34.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
33.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
33.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
33.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
29.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
22.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
21.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
21.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
14.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
12.9
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.