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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 639.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 319.2
Min RPKM: 54.8
Std RPKM: 61.5
Median RPKM: 170.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
319.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
317.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
314.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
297.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
295.9
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
273.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
267.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
266.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
263.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
260.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
257.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
252.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
247.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
247.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
245.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
244.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
241.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
240.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
233.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
232.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
231.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
227.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
227.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
218.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
216.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
215.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
215.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
213.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
208.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
205.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
204.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
203.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
202.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
202.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
199.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
198.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
195.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
193.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
191.6
GTEX-11PRG-2926-SM-5987A
50-59 years, male
191.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
190.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
190.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
188.4
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
187.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
186.9
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
186.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
180.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
178.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
178.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
177.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
177.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
177.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
174.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
174.3
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
173.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
173.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
170.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
170.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
169.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
169.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
165.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
162.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
162.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
160.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
160.8
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
159.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
159.4
GTEX-145MF-2726-SM-5O995
50-59 years, male
158.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
155.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
155.2
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
153.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
151.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
151.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
147.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
146.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
145.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
143.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
142.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
141.1
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
140.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
132.3
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
128.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
128.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
127.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
127.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
126.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
125.7
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
120.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
113.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
111.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
109.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
108.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
108.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
107.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
107.3
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
104.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
103.1
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
99.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
98.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
94.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
93.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
91.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
89.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
88.5
GTEX-11GSP-3226-SM-5986O
60-69 years, female
85.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
81.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
79.7
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
74.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
72.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
72.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
64.6
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
57.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
55.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
54.8
Show all
Brain - Frontal Cortex (BA9) RPKM: 159.6
Samples: 108
Max RPKM: 328.7
Min RPKM: 20.0
Std RPKM: 68.9
Median RPKM: 168.6
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
328.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
308.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
301.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
288.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
270.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
260.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
259.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
258.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
256.0
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
255.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
251.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
250.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
246.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
241.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
240.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
238.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
235.9
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
234.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
231.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
226.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
216.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
213.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
212.7
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
210.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
209.3
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
207.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
203.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
202.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
200.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
200.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
199.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
199.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
199.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
198.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
189.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
188.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
187.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
186.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
185.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
185.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
184.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
179.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
179.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
179.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
178.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
178.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
176.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
176.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
175.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
175.0
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
174.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
174.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
171.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
169.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
167.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
165.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
165.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
162.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
160.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
159.7
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
157.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
154.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
151.4
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
149.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
146.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
144.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
142.9
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
138.1
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
138.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
131.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
130.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
127.3
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
126.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
125.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
122.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
121.6
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
117.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
117.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
106.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
106.5
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
105.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
104.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
103.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
100.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
99.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
95.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
90.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
88.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
82.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
79.8
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
79.5
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
78.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
75.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
74.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
70.8
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
69.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
65.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
65.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
63.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
57.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
55.3
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
47.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
41.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
40.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
36.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
34.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
25.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
20.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.