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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 73.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 79.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 44.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 184.3
Min RPKM: 42.2
Std RPKM: 25.6
Median RPKM: 90.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
184.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
173.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
170.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
165.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
161.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
153.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
150.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
149.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
149.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
147.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
146.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
140.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
139.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
138.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
137.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
136.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
135.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
134.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
133.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
132.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
132.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
131.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
129.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
129.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
129.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
129.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
128.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
128.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
126.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
126.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
125.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
125.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
122.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
122.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
120.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
119.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
119.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
119.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
119.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
118.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
116.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
115.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
114.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
113.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
113.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
113.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
111.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
111.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
110.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
110.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
110.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
109.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
107.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
107.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
107.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
106.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
106.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
105.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
105.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
104.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
103.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
102.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
101.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
101.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
101.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
100.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
100.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
100.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
100.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
100.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
100.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
100.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
99.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
99.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
98.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
98.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
98.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
98.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
97.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
97.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
96.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
96.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
96.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
96.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
95.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
95.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
95.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
95.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
95.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
94.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
93.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
93.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
93.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
92.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
92.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
92.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
92.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
92.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
92.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
92.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
91.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
91.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
91.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
91.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
91.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
90.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
90.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
90.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
89.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
89.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
89.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
89.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
89.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
88.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
88.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
88.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
87.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
87.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
87.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
87.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
86.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
86.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
86.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
85.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
85.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
84.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
84.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
84.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
84.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
84.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
84.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
83.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
83.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
83.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
83.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
83.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
83.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
82.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
81.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
81.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
81.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
81.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
80.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
80.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
80.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
80.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
79.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
79.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
79.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
78.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
78.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
78.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
78.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
78.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
77.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
77.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
77.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
77.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
77.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
77.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
76.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
76.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
76.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
76.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
75.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
75.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
74.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
73.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
73.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
73.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
73.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
73.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
73.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
73.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
73.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
72.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
72.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
72.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
71.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
70.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
70.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
70.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
70.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
70.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
70.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
69.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
69.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
68.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
68.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
68.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
67.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
66.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
66.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
66.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
65.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
65.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
64.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
64.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
64.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
64.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
63.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
62.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
62.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
62.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
61.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
59.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
59.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
58.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
54.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
52.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
50.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
48.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
46.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
42.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.