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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 32.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 26.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 21.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 27.1
Min RPKM: 5.1
Std RPKM: 3.2
Median RPKM: 11.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
27.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
23.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
22.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
22.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
20.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
19.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
19.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
18.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
18.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
18.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
17.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
17.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
17.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
17.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
17.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
16.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
16.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
16.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
16.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
15.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
15.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
15.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
15.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
15.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
15.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
14.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
14.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
14.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
14.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
14.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
14.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
14.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
14.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
14.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
14.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
14.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
14.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
14.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
13.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
13.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
13.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
13.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
13.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
13.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
13.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
13.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
13.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
13.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
13.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
13.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
13.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
13.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
12.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
12.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
12.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
12.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
12.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
12.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
12.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
12.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
12.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
12.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
12.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
12.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
12.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
12.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
12.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
12.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
12.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
12.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
12.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
12.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
12.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
12.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
11.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
11.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
11.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
11.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
11.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
11.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
11.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
11.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
11.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
11.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
11.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
11.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
11.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
11.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
11.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
11.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
11.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
11.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
11.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
11.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
11.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
11.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
11.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
11.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
11.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
11.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
11.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
11.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
11.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
11.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
11.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
11.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
11.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
11.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
11.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
10.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
10.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
10.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
10.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
10.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
10.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
10.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
10.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
10.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
10.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
10.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
10.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
10.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
10.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
10.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
10.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
10.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
10.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
10.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
10.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
10.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
10.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
10.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
10.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
10.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
10.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
10.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
9.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
9.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
9.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
9.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
9.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
9.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
9.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
9.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
9.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
9.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
9.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
9.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
9.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
9.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
9.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
9.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
9.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
9.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
9.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
9.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
9.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
9.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
9.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
9.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
9.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
9.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
9.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
9.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
9.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
9.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
9.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
9.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
9.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
8.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
8.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
8.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
8.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
8.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
8.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
8.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
8.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
8.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
8.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
8.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
8.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
8.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
8.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
8.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
8.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
8.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
8.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
8.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
8.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
8.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
8.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
8.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
8.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
8.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
8.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
8.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
7.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
7.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
7.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
7.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
7.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
7.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
7.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
7.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
7.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
7.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
7.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
7.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
7.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
7.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
6.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
6.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
5.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
5.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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