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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 239.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 275.9
Min RPKM: 24.5
Std RPKM: 63.2
Median RPKM: 156.2
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
275.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
260.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
259.6
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
253.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
250.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
242.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
239.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
236.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
236.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
233.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
233.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
230.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
227.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
225.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
218.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
213.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
212.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
211.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
207.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
205.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
204.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
203.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
202.7
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
202.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
201.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
195.6
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
194.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
191.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
188.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
187.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
185.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
185.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
183.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
182.6
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
182.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
180.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
179.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
179.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
178.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
174.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
174.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
174.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
172.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
171.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
171.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
165.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
165.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
165.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
163.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
163.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
163.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
161.6
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
161.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
159.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
157.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
156.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
156.2
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
156.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
155.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
155.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
153.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
150.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
148.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
148.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
147.3
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
147.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
144.9
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
143.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
141.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
140.9
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
140.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
140.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
138.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
138.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
136.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
133.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
132.5
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
114.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
112.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
111.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
108.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
105.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
100.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
90.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
87.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
87.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
82.9
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
82.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
81.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
79.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
79.3
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
73.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
67.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
67.7
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
66.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
66.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
62.6
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
61.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
58.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
57.2
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
57.0
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
55.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
55.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
55.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
54.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
52.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
42.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
41.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
37.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
35.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
33.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
32.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
31.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
24.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 211.4
Samples: 108
Max RPKM: 483.6
Min RPKM: 18.5
Std RPKM: 117.4
Median RPKM: 211.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
483.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
463.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
435.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
425.1
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
412.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
406.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
395.8
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
393.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
381.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
368.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
360.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
358.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
355.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
354.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
345.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
344.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
343.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
341.1
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
338.5
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
321.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
315.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
315.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
314.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
310.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
307.8
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
303.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
299.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
293.9
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
291.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
288.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
283.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
282.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
280.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
276.1
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
274.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
272.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
267.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
265.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
263.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
261.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
259.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
254.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
252.6
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
250.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
245.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
234.9
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
233.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
233.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
232.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
231.8
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
225.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
223.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
222.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
212.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
210.8
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
210.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
209.4
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
208.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
203.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
202.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
201.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
201.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
194.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
192.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
174.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
173.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
170.5
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
168.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
166.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
166.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
158.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
157.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
149.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
142.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
139.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
137.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
127.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
125.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
125.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
118.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
118.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
118.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
113.8
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
106.1
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
99.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
99.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
96.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
88.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
73.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
72.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
69.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
65.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
63.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
58.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
48.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
43.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
42.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
39.5
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
39.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
34.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
29.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
29.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
26.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
25.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
25.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
23.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
18.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
18.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.