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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 139.4
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 18.4
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 23.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 65.7
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 49.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 144.1
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 74.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 87.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 113.7
Min RPKM: 10.7
Std RPKM: 14.9
Median RPKM: 56.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
113.7
GTEX-REY6-1226-SM-48FDR
60-69 years, male
101.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
98.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
90.4
GTEX-S32W-1926-SM-4AD63
50-59 years, female
88.1
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
87.9
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
87.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
85.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
82.9
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
82.7
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
81.8
GTEX-QEL4-1226-SM-447A4
50-59 years, male
80.8
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
80.5
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
80.1
GTEX-12696-0826-SM-5EGGE
60-69 years, male
78.7
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
77.9
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
76.4
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
76.0
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
74.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
73.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
73.1
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
73.1
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
72.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
72.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
72.2
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
70.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
70.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
69.0
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
68.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
68.5
GTEX-P78B-1326-SM-3P611
40-49 years, female
68.2
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
68.0
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
66.8
GTEX-13113-1326-SM-5GCOI
60-69 years, female
66.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
65.1
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
65.0
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
64.0
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
63.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
63.2
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
63.2
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
61.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
61.1
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
60.8
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
60.6
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
60.5
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
60.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
59.7
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
59.5
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
59.5
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
58.8
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
58.8
GTEX-Q734-0326-SM-48U15
40-49 years, female
58.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
58.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
57.9
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
57.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
57.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
57.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
57.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
56.9
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
56.6
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
56.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
55.9
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
55.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
55.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
55.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
55.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
55.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
55.1
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
54.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
54.4
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
54.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
54.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
53.9
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
53.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
53.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
52.9
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
52.8
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
52.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
52.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
52.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
51.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
51.2
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
51.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
51.1
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
51.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
50.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
50.9
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
50.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
50.5
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
50.5
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
49.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
49.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
49.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
49.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
48.6
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
48.6
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
48.5
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
48.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
47.4
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
47.1
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
46.2
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
45.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
45.8
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
45.7
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
45.5
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
45.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
45.0
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
44.5
GTEX-13112-1426-SM-5EGH8
50-59 years, male
43.7
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
43.6
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
43.3
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
42.9
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
42.1
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
41.8
GTEX-11GSP-0626-SM-5986T
60-69 years, female
40.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
40.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
35.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
34.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
10.7
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.