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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 161.8
Min RPKM: 29.1
Std RPKM: 27.0
Median RPKM: 96.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
161.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
160.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
154.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
149.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
143.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
136.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
136.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
135.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
132.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
131.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
128.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
127.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
126.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
124.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
124.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
123.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
121.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
120.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
119.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
118.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
118.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
117.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
116.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
115.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
114.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
114.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
114.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
113.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
112.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
111.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
110.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
110.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
110.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
110.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
110.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
109.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
108.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
108.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
108.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
108.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
107.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
106.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
106.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
105.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
104.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
104.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
103.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
102.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
102.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
102.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
99.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
99.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
99.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
99.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
98.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
97.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
97.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
96.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
96.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
95.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
95.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
94.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
94.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
93.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
93.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
93.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
92.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
92.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
91.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
91.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
90.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
90.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
90.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
89.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
88.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
88.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
86.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
85.4
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
85.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
85.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
82.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
82.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
80.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
79.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
79.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
78.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
78.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
78.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
75.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
72.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
71.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
71.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
70.7
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
69.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
67.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
66.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
65.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
64.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
63.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
63.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
62.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
59.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
58.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
57.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
57.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
56.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
54.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
53.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
52.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
50.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
49.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
48.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
47.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
45.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
44.2
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
44.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
29.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.