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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 511.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 181.8
Min RPKM: 36.1
Std RPKM: 36.2
Median RPKM: 124.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
181.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
181.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
180.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
179.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
177.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
176.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
175.2
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
173.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
166.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
165.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
164.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
164.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
162.8
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
160.6
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
158.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
157.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
155.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
155.4
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
155.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
155.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
154.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
153.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
153.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
152.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
151.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
150.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
149.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
149.3
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
148.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
148.6
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
145.4
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
144.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
144.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
143.9
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
143.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
138.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
138.6
GTEX-145MF-2726-SM-5O995
50-59 years, male
138.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
137.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
137.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
136.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
135.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
135.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
134.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
134.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
134.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
133.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
132.3
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
132.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
131.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
130.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
130.6
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
128.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
127.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
127.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
127.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
124.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
124.1
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
123.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
122.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
121.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
119.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
117.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
116.5
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
115.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
115.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
111.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
111.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
110.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
107.9
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
107.7
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
103.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
101.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
101.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
99.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
99.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
97.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
97.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
94.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
93.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
93.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
93.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
92.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
90.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
89.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
89.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
88.4
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
87.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
86.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
86.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
85.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
84.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
84.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
83.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
76.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
76.3
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
74.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
74.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
73.5
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
72.3
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
71.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
70.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
69.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
68.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
65.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
62.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
61.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
61.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
53.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
53.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
51.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
49.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
39.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
36.1
Show all
Brain - Frontal Cortex (BA9) RPKM: 133.7
Samples: 108
Max RPKM: 244.9
Min RPKM: 34.5
Std RPKM: 49.8
Median RPKM: 140.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
244.9
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
220.1
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
209.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
207.5
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
203.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
200.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
198.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
194.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
194.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
193.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
189.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
188.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
188.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
187.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
187.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
185.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
185.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
184.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
183.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
183.7
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
181.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
181.2
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
179.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
179.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
178.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
177.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
177.3
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
175.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
174.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
172.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
172.1
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
172.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
172.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
165.7
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
164.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
163.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
163.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
163.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
163.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
160.6
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
158.2
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
158.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
156.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
156.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
152.7
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
147.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
147.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
146.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
145.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
145.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
144.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
142.8
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
141.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
140.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
139.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
138.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
135.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
135.1
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
132.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
131.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
131.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
130.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
130.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
128.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
128.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
127.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
123.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
121.7
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
121.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
119.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
118.3
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
117.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
116.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
116.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
116.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
116.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
108.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
107.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
106.4
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
102.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
99.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
94.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
90.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
83.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
83.2
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
80.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
79.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
76.4
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
72.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
69.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
68.7
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
68.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
67.6
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
64.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
64.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
63.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
61.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
54.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
49.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
48.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
47.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
46.2
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
45.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
43.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
43.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
43.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
39.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
34.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.