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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 51.9
Min RPKM: 5.7
Std RPKM: 11.3
Median RPKM: 17.3
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
51.9
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
47.8
GTEX-Y111-2626-SM-4TT24
50-59 years, male
47.2
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
42.8
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
42.2
GTEX-X261-2426-SM-4PQZU
50-59 years, male
41.4
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
38.4
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
34.0
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
31.8
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
30.3
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
30.1
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
29.4
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
29.2
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
28.0
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
27.6
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
26.3
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
25.7
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
24.9
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
24.8
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
24.7
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
24.6
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
24.6
GTEX-13O21-1926-SM-5MR39
50-59 years, male
24.0
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
22.8
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
22.6
GTEX-1445S-2926-SM-5O993
60-69 years, male
18.6
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
18.0
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
18.0
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
17.3
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
16.8
GTEX-11P82-0926-SM-5986X
20-29 years, male
16.6
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
16.0
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
16.0
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
15.2
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
15.2
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
15.1
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
14.7
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
14.6
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
14.5
GTEX-13113-1526-SM-5EGHV
60-69 years, female
14.4
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
14.1
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
13.7
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
13.7
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
13.7
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
12.9
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
12.0
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
11.8
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
11.6
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
10.3
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
9.8
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
8.9
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
8.5
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
7.2
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
7.0
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
6.5
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
6.0
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
5.7
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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