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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 890.8
Min RPKM: 118.2
Std RPKM: 144.8
Median RPKM: 260.3
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
890.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
815.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
733.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
662.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
619.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
616.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
599.2
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
570.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
495.7
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
413.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
408.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
402.3
GTEX-RU72-2226-SM-46MUE
50-59 years, female
390.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
385.0
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
379.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
378.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
366.1
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
355.6
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
355.1
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
344.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
340.6
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
338.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
333.5
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
331.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
320.9
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
310.3
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
307.6
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
290.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
289.0
GTEX-11I78-1926-SM-59878
50-59 years, female
288.9
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
286.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
283.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
278.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
275.7
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
274.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
273.6
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
273.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
268.9
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
268.0
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
267.0
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
266.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
266.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
266.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
265.0
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
263.9
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
262.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
261.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
260.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
260.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
257.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
246.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
244.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
243.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
240.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
240.3
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
238.9
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
234.5
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
228.7
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
224.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
224.2
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
222.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
219.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
218.3
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
216.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
213.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
208.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
208.4
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
205.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
205.1
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
204.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
204.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
199.7
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
195.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
192.7
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
192.3
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
192.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
191.5
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
189.4
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
187.4
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
184.6
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
181.7
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
179.4
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
177.3
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
176.4
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
175.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
172.7
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
169.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
164.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
163.5
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
150.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
132.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
132.0
GTEX-Q734-0726-SM-48TZP
40-49 years, female
129.7
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
121.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
119.8
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
118.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
118.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.