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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 41
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 498.4
Min RPKM: 17.2
Std RPKM: 88.8
Median RPKM: 194.7
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
498.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
465.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
414.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
390.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
384.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
372.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
351.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
337.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
326.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
321.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
318.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
306.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
301.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
298.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
285.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
284.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
282.1
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
266.2
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
265.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
265.1
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
262.0
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
254.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
254.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
252.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
252.3
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
252.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
252.1
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
250.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
250.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
249.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
248.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
244.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
243.3
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
241.7
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
234.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
228.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
228.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
228.9
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
224.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
224.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
222.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
220.7
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
219.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
215.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
214.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
214.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
214.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
214.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
212.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
205.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
204.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
204.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
203.8
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
200.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
200.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
200.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
199.0
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
190.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
189.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
188.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
185.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
185.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
180.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
180.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
178.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
173.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
173.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
173.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
172.4
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
169.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
167.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
165.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
163.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
159.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
153.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
150.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
148.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
148.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
147.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
146.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
146.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
146.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
144.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
142.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
138.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
138.3
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
137.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
136.6
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
136.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
135.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
130.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
116.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
114.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
114.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
107.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
104.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
104.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
100.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
97.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
92.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
85.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
84.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
84.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
78.1
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
78.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
69.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
68.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
63.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
63.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
62.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
60.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
58.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
58.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
17.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 190.1
Samples: 108
Max RPKM: 561.2
Min RPKM: 33.3
Std RPKM: 99.3
Median RPKM: 166.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
561.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
503.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
463.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
449.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
385.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
379.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
361.5
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
325.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
319.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
319.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
316.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
312.0
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
294.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
293.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
288.7
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
280.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
276.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
271.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
269.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
269.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
266.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
265.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
265.0
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
264.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
253.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
251.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
247.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
246.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
239.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
238.9
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
238.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
234.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
230.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
230.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
227.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
221.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
218.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
218.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
218.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
214.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
214.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
213.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
212.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
206.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
202.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
202.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
199.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
197.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
190.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
179.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
169.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
169.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
167.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
166.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
166.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
163.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
160.5
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
160.0
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
159.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
153.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
151.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
146.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
145.9
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
145.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
144.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
141.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
141.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
141.5
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
139.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
138.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
138.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
137.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
135.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
131.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
130.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
129.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
123.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
120.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
118.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
117.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
117.1
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
115.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
112.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
106.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
104.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
101.1
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
100.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
100.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
99.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
98.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
97.6
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
97.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
91.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
89.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
88.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
86.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
86.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
84.4
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
83.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
83.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
81.7
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
76.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
72.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
64.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
63.6
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
56.7
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
33.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
33.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.