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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
- Antibody HPA003925
Neuronal cells
Not detected
Glial cells
Not detected
Neuronal projections
High
Synapses
Medium
Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
- Antibody HPA064734
Neuronal cells
Not detected
Glial cells
Not detected
Neuronal projections
High
Synapses
Medium
Antibody stainingi
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 518.0
Min RPKM: 42.7
Std RPKM: 81.4
Median RPKM: 171.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
518.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
381.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
365.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
347.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
346.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
320.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
315.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
308.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
291.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
277.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
276.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
276.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
276.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
271.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
260.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
260.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
256.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
256.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
256.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
247.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
245.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
240.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
239.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
236.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
235.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
231.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
229.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
228.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
227.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
226.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
222.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
222.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
218.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
218.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
217.6
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
213.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
213.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
207.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
205.3
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
201.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
201.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
200.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
200.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
197.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
196.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
190.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
189.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
188.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
186.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
185.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
181.3
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
180.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
178.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
177.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
177.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
177.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
173.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
173.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
171.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
171.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
170.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
169.4
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
168.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
167.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
167.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
164.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
162.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
160.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
160.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
156.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
155.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
153.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
151.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
150.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
148.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
147.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
147.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
139.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
138.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
132.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
129.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
127.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
127.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
123.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
121.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
116.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
111.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
110.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
109.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
106.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
105.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
103.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
100.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
98.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
96.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
95.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
92.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
88.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
86.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
83.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
83.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
82.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
81.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
80.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
79.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
78.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
78.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
78.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
76.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
69.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
67.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
64.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
63.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
52.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
47.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
44.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
42.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.