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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 166.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 59.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 51.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 146.5
Min RPKM: 8.8
Std RPKM: 19.4
Median RPKM: 55.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
146.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
135.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
125.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
108.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
102.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
101.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
99.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
98.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
97.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
96.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
94.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
93.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
91.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
89.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
87.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
86.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
86.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
85.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
85.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
85.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
84.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
84.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
84.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
83.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
81.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
80.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
79.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
79.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
78.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
78.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
78.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
77.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
77.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
76.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
76.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
76.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
75.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
75.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
75.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
75.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
74.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
74.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
74.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
72.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
72.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
72.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
71.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
71.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
71.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
71.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
70.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
70.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
70.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
69.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
69.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
69.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
69.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
68.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
68.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
68.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
68.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
68.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
67.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
67.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
67.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
66.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
66.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
66.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
66.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
66.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
65.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
65.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
65.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
65.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
64.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
64.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
64.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
64.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
63.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
63.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
63.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
63.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
62.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
62.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
62.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
62.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
62.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
62.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
62.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
61.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
60.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
60.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
59.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
59.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
59.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
59.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
59.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
58.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
58.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
58.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
58.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
57.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
57.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
56.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
56.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
56.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
56.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
55.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
55.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
55.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
55.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
55.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
54.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
54.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
53.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
53.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
53.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
53.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
53.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
53.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
53.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
53.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
52.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
52.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
52.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
52.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
52.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
51.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
51.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
51.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
51.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
51.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
51.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
51.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
51.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
51.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
50.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
50.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
50.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
50.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
49.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
49.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
49.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
49.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
49.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
48.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
48.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
48.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
48.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
48.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
47.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
47.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
47.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
47.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
47.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
47.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
47.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
46.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
46.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
46.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
46.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
46.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
46.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
46.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
46.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
46.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
45.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
45.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
45.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
45.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
44.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
44.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
44.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
44.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
43.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
43.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
43.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
42.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
42.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
41.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
41.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
41.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
41.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
41.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
41.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
41.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
40.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
40.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
40.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
40.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
40.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
39.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
39.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
39.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
38.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
38.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
38.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
37.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
36.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
36.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
36.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
35.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
35.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
35.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
34.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
34.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
33.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
32.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
32.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
23.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
21.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
20.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
15.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
8.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.