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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 642.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 270.9
Min RPKM: 21.3
Std RPKM: 61.0
Median RPKM: 140.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
270.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
264.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
254.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
252.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
252.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
242.6
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
239.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
234.3
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
229.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
227.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
224.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
219.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
218.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
217.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
217.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
217.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
215.7
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
212.2
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
208.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
204.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
201.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
194.8
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
193.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
192.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
191.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
190.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
190.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
184.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
183.4
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
182.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
176.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
176.2
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
175.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
175.0
GTEX-X585-3026-SM-46MWF
50-59 years, male
174.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
172.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
172.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
171.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
169.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
164.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
163.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
162.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
162.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
161.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
160.5
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
159.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
159.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
157.4
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
153.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
152.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
151.8
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
149.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
149.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
146.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
145.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
142.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
141.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
138.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
138.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
137.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
137.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
133.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
132.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
132.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
131.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
128.9
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
128.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
127.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
125.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
118.2
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
118.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
117.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
114.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
114.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
113.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
112.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
106.5
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
104.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
102.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
101.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
99.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
97.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
87.1
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
86.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
85.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
85.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
84.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
83.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
82.2
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
80.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
78.3
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
77.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
74.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
73.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
70.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
70.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
69.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
69.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
68.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
62.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
60.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
60.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
59.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
57.5
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
57.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
57.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
54.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
51.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
45.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
40.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
33.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
25.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
25.0
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
21.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 187.6
Samples: 108
Max RPKM: 406.3
Min RPKM: 23.1
Std RPKM: 97.7
Median RPKM: 201.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
406.3
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
366.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
350.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
342.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
339.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
332.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
329.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
325.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
325.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
318.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
306.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
301.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
298.9
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
296.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
296.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
295.6
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
294.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
293.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
293.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
293.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
287.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
286.9
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
279.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
276.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
271.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
271.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
270.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
269.5
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
265.5
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
264.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
263.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
246.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
246.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
245.9
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
243.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
241.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
240.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
238.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
237.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
236.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
235.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
232.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
229.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
227.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
227.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
227.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
218.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
217.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
214.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
212.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
211.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
210.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
208.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
206.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
196.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
194.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
187.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
187.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
185.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
177.0
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
176.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
175.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
166.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
164.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
157.8
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
157.2
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
157.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
154.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
153.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
148.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
146.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
140.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
138.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
132.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
127.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
121.1
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
119.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
109.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
105.6
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
97.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
97.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
96.2
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
95.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
90.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
79.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
77.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
76.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
76.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
71.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
71.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
66.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
64.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
59.5
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
58.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
57.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
57.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
47.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
44.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
43.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
41.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
37.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
34.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
33.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
31.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
29.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
26.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
25.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
23.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.