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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 319.8
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 535.4
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 283.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 353.7
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 375.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 260.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 367.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 517.8
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 297.4
Min RPKM: 33.4
Std RPKM: 48.4
Median RPKM: 135.3
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
297.4
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
258.4
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
246.8
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
236.8
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
236.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
233.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
228.4
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
219.2
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
217.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
214.9
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
212.5
GTEX-R53T-0326-SM-48FEC
50-59 years, female
206.9
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
205.0
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
203.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
202.8
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
202.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
200.2
GTEX-1399T-0826-SM-5IFES
60-69 years, male
199.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
197.3
GTEX-P78B-1326-SM-3P611
40-49 years, female
194.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
194.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
185.8
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
184.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
183.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
182.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
181.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
180.7
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
179.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
176.1
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
173.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
171.6
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
167.5
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
166.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
162.7
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
162.5
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
161.2
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
160.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
159.9
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
158.0
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
153.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
152.3
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
152.1
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
150.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
150.0
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
148.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
147.9
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
146.8
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
145.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
144.8
GTEX-13113-1326-SM-5GCOI
60-69 years, female
142.2
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
141.6
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
141.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
141.2
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
139.9
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
137.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
135.7
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
135.5
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
135.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
135.4
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
135.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
133.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
132.5
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
131.5
GTEX-Q734-0326-SM-48U15
40-49 years, female
130.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
129.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
129.2
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
127.2
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
126.4
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
125.7
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
125.5
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
125.2
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
124.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
124.7
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
124.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
124.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
123.9
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
121.4
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
119.8
GTEX-QESD-2026-SM-447BI
20-29 years, male
119.2
GTEX-YECK-1926-SM-4W21H
60-69 years, male
117.7
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
117.2
GTEX-QEL4-1226-SM-447A4
50-59 years, male
116.9
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
116.2
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
115.1
GTEX-12696-0826-SM-5EGGE
60-69 years, male
114.3
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
113.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
110.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
110.6
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
109.0
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
104.3
GTEX-REY6-1226-SM-48FDR
60-69 years, male
103.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
102.7
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
102.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
101.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
101.5
GTEX-S32W-1926-SM-4AD63
50-59 years, female
100.1
GTEX-11GSP-0626-SM-5986T
60-69 years, female
97.3
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
97.3
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
94.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
94.3
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
94.3
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
93.8
GTEX-11ZUS-2526-SM-59872
30-39 years, male
93.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
92.5
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
89.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
89.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
87.5
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
86.7
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
84.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
83.2
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
80.5
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
78.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
71.1
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
67.1
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
65.9
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
64.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
45.4
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
40.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
33.4
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
