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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 133.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 98.2
Min RPKM: 22.0
Std RPKM: 17.6
Median RPKM: 62.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
98.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
98.1
GTEX-X585-3026-SM-46MWF
50-59 years, male
96.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
94.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
91.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
91.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
88.2
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
87.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
87.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
86.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
85.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
85.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
85.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
82.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
81.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
81.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
80.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
80.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
78.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
77.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
77.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
77.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
77.0
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
76.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
75.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
75.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
75.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
75.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
74.7
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
72.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
71.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
70.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
70.3
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
69.8
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
68.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
68.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
68.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
68.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
67.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
67.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
67.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
67.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
66.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
66.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
65.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
65.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
65.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
65.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
65.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
64.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
64.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
63.9
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
63.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
63.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
63.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
63.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
63.0
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
62.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
62.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
62.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
61.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
61.3
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
59.6
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
59.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
59.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
58.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
57.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
57.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
56.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
55.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
54.9
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
53.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
53.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
52.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
52.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
51.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
50.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
50.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
50.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
49.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
49.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
47.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
47.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
47.0
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
46.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
46.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
46.1
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
45.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
45.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
45.6
GTEX-1128S-2726-SM-5H12C
60-69 years, female
44.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
44.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
42.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
42.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
42.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
41.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
41.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
41.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
40.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
40.4
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
40.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
39.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
38.9
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
38.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
37.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
37.2
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
35.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
33.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
32.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
28.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
27.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
23.9
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
23.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
22.0
Show all
Brain - Frontal Cortex (BA9) RPKM: 56.6
Samples: 108
Max RPKM: 111.2
Min RPKM: 22.5
Std RPKM: 19.5
Median RPKM: 56.9
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
111.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
102.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
96.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
95.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
89.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
85.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
85.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
84.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
84.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
83.8
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
82.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
82.0
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
81.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
79.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
78.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
78.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
77.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
76.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
75.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
74.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
73.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
73.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
72.1
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
71.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
71.2
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
70.4
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
70.4
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
70.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
69.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
69.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
69.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
68.9
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
68.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
68.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
67.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
66.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
65.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
64.8
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
64.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
63.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
62.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
62.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
62.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
62.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
62.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
60.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
59.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
59.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
59.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
59.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
58.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
57.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
57.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
56.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
56.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
56.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
55.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
55.0
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
54.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
54.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
54.1
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
53.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
52.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
50.9
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
50.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
50.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
49.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
49.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
49.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
49.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
48.6
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
47.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
47.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
47.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
45.7
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
43.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
42.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
41.7
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
41.3
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
41.1
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
40.1
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
39.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
39.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
38.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
37.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
37.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
37.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
37.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
36.2
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
36.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
35.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
33.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
33.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
32.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
32.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
30.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
30.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
28.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
28.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
27.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
27.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
27.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
26.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
26.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
25.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
24.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
23.3
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
22.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.