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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 841.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 963.0
Min RPKM: 77.3
Std RPKM: 166.0
Median RPKM: 382.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
963.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
938.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
916.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
804.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
796.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
774.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
682.4
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
679.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
634.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
606.2
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
598.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
579.0
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
577.7
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
572.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
570.9
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
570.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
569.4
GTEX-145MF-2726-SM-5O995
50-59 years, male
563.4
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
543.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
523.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
514.0
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
510.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
503.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
487.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
485.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
481.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
478.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
477.8
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
473.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
456.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
456.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
451.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
449.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
449.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
446.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
444.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
442.3
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
441.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
438.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
434.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
433.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
431.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
431.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
429.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
426.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
423.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
423.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
420.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
420.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
414.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
406.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
406.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
405.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
397.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
389.9
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
387.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
382.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
382.2
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
380.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
378.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
372.9
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
372.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
371.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
367.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
363.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
360.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
358.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
357.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
356.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
351.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
348.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
343.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
338.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
333.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
332.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
328.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
326.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
324.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
324.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
323.1
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
315.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
315.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
311.9
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
305.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
293.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
289.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
286.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
285.8
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
280.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
268.6
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
267.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
262.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
259.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
257.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
257.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
247.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
246.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
245.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
244.8
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
238.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
237.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
227.3
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
214.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
208.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
199.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
191.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
188.9
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
182.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
171.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
143.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
139.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
104.2
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
96.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
77.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 371.3
Samples: 108
Max RPKM: 1145.8
Min RPKM: 64.8
Std RPKM: 197.7
Median RPKM: 317.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
1145.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
1055.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
946.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
811.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
806.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
754.9
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
742.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
669.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
629.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
625.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
624.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
623.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
611.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
603.5
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
603.1
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
581.9
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
548.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
542.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
515.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
509.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
505.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
504.4
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
502.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
499.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
499.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
492.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
476.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
469.9
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
449.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
447.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
447.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
444.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
435.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
431.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
416.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
406.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
388.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
388.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
388.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
386.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
384.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
382.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
382.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
373.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
371.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
362.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
354.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
353.8
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
348.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
343.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
342.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
341.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
324.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
320.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
315.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
314.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
308.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
307.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
300.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
296.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
294.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
294.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
288.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
287.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
286.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
284.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
278.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
277.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
266.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
265.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
265.0
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
260.9
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
250.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
250.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
246.9
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
240.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
239.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
237.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
235.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
234.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
234.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
232.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
229.4
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
222.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
221.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
217.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
215.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
213.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
212.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
205.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
204.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
200.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
197.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
193.5
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
193.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
187.8
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
185.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
175.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
175.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
171.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
167.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
145.7
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
141.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
138.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
123.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
101.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
90.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
64.8
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.