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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 136.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 121.2
Min RPKM: 47.9
Std RPKM: 13.5
Median RPKM: 82.0
GTEX-X585-3026-SM-46MWF
50-59 years, male
121.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
105.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
105.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
101.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
101.2
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
99.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
98.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
98.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
97.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
97.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
96.9
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
96.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
96.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
96.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
96.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
95.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
95.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
95.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
94.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
93.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
93.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
92.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
92.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
92.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
92.4
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
92.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
92.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
92.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
92.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
91.8
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
91.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
91.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
90.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
90.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
90.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
90.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
89.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
89.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
89.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
88.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
88.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
88.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
88.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
87.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
87.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
87.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
86.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
85.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
85.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
85.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
85.6
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
85.6
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
84.5
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
83.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
82.6
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
82.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
82.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
81.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
81.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
81.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
80.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
80.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
79.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
79.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
79.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
79.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
79.3
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
79.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
79.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
78.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
78.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
78.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
78.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
78.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
77.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
77.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
76.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
75.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
75.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
75.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
75.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
74.6
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
73.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
73.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
73.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
72.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
72.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
70.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
70.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
70.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
70.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
68.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
68.6
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
68.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
67.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
67.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
67.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
66.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
66.0
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
64.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
62.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
61.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
61.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
60.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
60.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
59.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
59.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
57.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
57.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
56.5
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
52.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
49.9
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
48.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
47.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 96.6
Samples: 108
Max RPKM: 143.8
Min RPKM: 37.6
Std RPKM: 20.5
Median RPKM: 100.2
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
143.8
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
138.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
133.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
131.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
127.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
126.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
125.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
124.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
124.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
123.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
123.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
117.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
116.5
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
116.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
115.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
115.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
114.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
114.4
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
112.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
112.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
112.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
111.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
111.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
111.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
111.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
111.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
110.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
110.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
109.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
109.5
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
109.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
109.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
108.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
108.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
107.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
106.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
105.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
105.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
105.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
104.6
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
104.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
104.5
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
104.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
104.2
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
103.7
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
103.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
102.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
102.7
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
101.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
101.6
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
101.2
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
100.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
100.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
100.2
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
100.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
99.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
99.2
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
98.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
98.2
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
97.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
96.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
94.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
94.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
94.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
93.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
92.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
91.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
91.8
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
91.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
91.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
91.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
91.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
90.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
90.5
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
90.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
90.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
89.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
88.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
88.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
86.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
86.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
83.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
83.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
83.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
82.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
81.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
80.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
80.7
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
77.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
77.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
76.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
75.8
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
75.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
74.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
72.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
70.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
68.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
66.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
64.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
64.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
61.0
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
60.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
53.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
50.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
50.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
48.5
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
47.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
37.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.