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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 224.9
Min RPKM: 38.1
Std RPKM: 32.4
Median RPKM: 88.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
224.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
188.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
177.5
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
170.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
164.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
154.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
148.8
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
148.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
143.3
GTEX-13111-0126-SM-5EGHO
50-59 years, male
141.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
138.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
137.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
136.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
133.9
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
133.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
130.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
128.6
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
128.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
125.1
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
121.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
121.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
120.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
120.1
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
118.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
118.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
117.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
117.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
116.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
116.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
114.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
114.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
113.9
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
112.9
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
111.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
110.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
106.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
106.5
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
105.4
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
102.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
101.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
100.4
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
98.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
97.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
96.2
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
95.0
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
94.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
92.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
92.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
92.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
90.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
89.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
89.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
86.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
86.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
86.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
85.6
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
84.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
84.7
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
83.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
83.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
83.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
82.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
82.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
81.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
81.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
81.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
81.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
81.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
81.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
80.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
80.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
80.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
80.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
79.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
79.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
78.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
78.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
78.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
78.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
76.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
76.1
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
75.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
73.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
72.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
72.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
72.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
72.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
71.7
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
71.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
71.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
67.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
66.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
66.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
62.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
62.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
61.9
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
61.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
55.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
52.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
52.1
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
49.4
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
49.1
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
38.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
38.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.