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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 382.8
Min RPKM: 119.2
Std RPKM: 43.3
Median RPKM: 192.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
382.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
306.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
284.1
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
280.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
278.6
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
272.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
271.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
265.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
254.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
252.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
252.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
251.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
249.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
245.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
245.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
242.7
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
238.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
237.3
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
235.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
233.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
233.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
229.4
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
226.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
225.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
224.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
223.8
GTEX-Q734-0226-SM-48U1A
40-49 years, female
221.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
219.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
218.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
217.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
216.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
216.1
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
215.0
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
214.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
212.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
211.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
211.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
210.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
209.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
207.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
206.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
205.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
205.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
205.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
204.5
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
204.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
203.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
203.0
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
199.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
198.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
198.1
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
193.3
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
192.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
192.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
191.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
191.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
190.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
190.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
189.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
187.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
185.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
185.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
185.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
183.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
182.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
181.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
178.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
176.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
175.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
173.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
173.5
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
173.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
173.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
172.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
172.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
170.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
169.1
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
168.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
165.6
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
165.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
165.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
164.5
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
162.7
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
161.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
159.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
158.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
157.4
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
156.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
154.6
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
154.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
153.3
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
153.1
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
149.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
144.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
142.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
140.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
139.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
139.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
135.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
134.0
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
132.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
130.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
125.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
119.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.