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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 123.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 15.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 26.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 247.8
Min RPKM: 15.2
Std RPKM: 44.1
Median RPKM: 59.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
247.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
246.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
234.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
222.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
221.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
198.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
198.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
192.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
177.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
173.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
171.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
160.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
159.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
158.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
155.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
153.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
149.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
143.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
133.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
132.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
130.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
129.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
128.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
126.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
123.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
122.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
122.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
121.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
120.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
118.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
118.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
118.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
117.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
113.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
113.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
111.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
111.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
108.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
106.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
104.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
102.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
100.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
95.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
95.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
95.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
94.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
92.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
91.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
90.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
89.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
89.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
86.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
83.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
83.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
81.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
80.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
79.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
79.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
78.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
78.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
78.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
78.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
78.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
77.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
76.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
76.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
75.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
74.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
74.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
74.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
73.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
72.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
72.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
72.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
72.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
71.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
71.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
71.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
71.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
71.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
70.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
70.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
69.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
69.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
68.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
68.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
68.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
68.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
68.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
68.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
67.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
67.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
67.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
67.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
66.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
65.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
65.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
65.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
65.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
64.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
62.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
61.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
61.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
60.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
60.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
60.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
59.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
59.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
58.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
58.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
58.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
58.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
58.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
58.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
58.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
56.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
55.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
55.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
55.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
55.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
54.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
54.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
54.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
53.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
53.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
53.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
53.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
53.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
53.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
51.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
51.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
51.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
51.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
51.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
50.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
50.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
50.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
49.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
49.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
49.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
48.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
47.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
47.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
47.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
47.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
46.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
46.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
46.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
46.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
46.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
46.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
45.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
45.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
45.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
44.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
44.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
44.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
44.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
44.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
43.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
43.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
43.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
42.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
42.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
42.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
42.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
42.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
42.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
42.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
42.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
42.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
41.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
41.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
41.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
41.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
41.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
41.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
39.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
39.8
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
39.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
39.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
39.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
39.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
38.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
37.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
37.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
37.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
36.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
35.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
35.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
34.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
34.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
34.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
34.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
33.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
32.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
32.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
32.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
31.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
31.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
30.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
30.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
29.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
28.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
28.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
28.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
27.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
26.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
25.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
20.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
20.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
19.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
19.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
15.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.