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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 309.5
Min RPKM: 71.4
Std RPKM: 36.4
Median RPKM: 146.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
309.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
250.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
240.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
218.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
216.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
208.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
203.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
201.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
200.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
200.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
194.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
192.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
189.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
189.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
185.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
184.1
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
182.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
181.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
180.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
178.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
175.8
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
174.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
172.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
172.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
170.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
170.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
170.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
170.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
169.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
168.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
167.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
166.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
166.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
166.1
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
164.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
163.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
163.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
162.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
162.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
161.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
161.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
160.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
160.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
158.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
157.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
157.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
153.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
153.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
150.4
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
150.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
149.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
147.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
146.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
145.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
145.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
145.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
144.6
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
144.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
142.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
140.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
140.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
139.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
137.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
136.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
136.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
134.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
131.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
131.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
130.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
130.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
129.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
128.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
127.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
127.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
127.6
GTEX-PX3G-0926-SM-48U12
20-29 years, female
127.4
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
127.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
126.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
126.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
124.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
124.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
123.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
123.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
123.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
122.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
122.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
121.1
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
119.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
118.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
118.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
118.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
117.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
114.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
114.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
109.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
107.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
105.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
102.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
100.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
98.2
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
96.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
88.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
79.0
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
71.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.