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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 284.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 182.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 146.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 560.2
Min RPKM: 28.5
Std RPKM: 56.5
Median RPKM: 101.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
560.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
461.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
372.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
265.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
236.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
224.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
206.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
192.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
192.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
190.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
189.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
185.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
182.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
179.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
178.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
176.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
165.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
164.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
161.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
158.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
157.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
157.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
155.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
153.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
152.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
149.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
147.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
146.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
144.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
144.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
144.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
142.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
142.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
141.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
141.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
140.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
140.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
139.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
137.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
137.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
137.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
136.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
134.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
133.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
133.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
132.8
GTEX-QEL4-2126-SM-447AE
50-59 years, male
131.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
131.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
130.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
130.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
128.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
127.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
127.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
127.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
127.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
125.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
125.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
125.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
121.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
121.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
121.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
120.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
120.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
120.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
119.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
119.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
118.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
118.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
118.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
117.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
116.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
116.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
116.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
116.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
116.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
115.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
114.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
113.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
113.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
112.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
112.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
112.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
112.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
112.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
112.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
111.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
111.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
110.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
110.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
109.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
109.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
109.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
108.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
108.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
108.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
107.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
106.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
106.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
105.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
104.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
104.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
103.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
103.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
103.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
102.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
102.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
102.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
101.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
101.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
101.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
100.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
100.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
99.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
99.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
98.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
97.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
96.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
95.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
95.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
95.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
94.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
94.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
93.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
93.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
92.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
92.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
92.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
92.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
92.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
91.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
91.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
90.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
90.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
90.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
89.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
89.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
88.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
88.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
88.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
87.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
87.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
86.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
86.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
85.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
85.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
85.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
84.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
84.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
84.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
84.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
84.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
83.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
83.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
83.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
83.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
83.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
82.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
82.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
81.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
81.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
80.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
80.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
80.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
79.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
79.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
79.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
79.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
78.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
77.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
77.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
77.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
77.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
76.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
76.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
76.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
76.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
74.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
73.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
72.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
71.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
70.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
70.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
69.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
68.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
68.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
67.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
66.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
65.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
64.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
64.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
64.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
64.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
63.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
63.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
62.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
62.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
62.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
62.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
61.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
59.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
59.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
58.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
58.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
58.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
57.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
57.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
55.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
54.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
54.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
53.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
52.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
49.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
48.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
28.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.