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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 74.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 148.2
Min RPKM: 13.6
Std RPKM: 27.9
Median RPKM: 70.1
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
148.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
148.2
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
130.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
125.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
124.7
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
116.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
116.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
115.0
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
113.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
110.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
109.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
108.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
105.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
105.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
104.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
103.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
103.6
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
103.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
103.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
100.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
98.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
97.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
97.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
96.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
94.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
89.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
89.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
87.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
86.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
84.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
84.7
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
84.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
83.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
83.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
82.5
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
82.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
82.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
82.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
81.1
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
80.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
79.6
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
79.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
79.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
78.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
78.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
77.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
77.3
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
77.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
75.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
74.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
73.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
71.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
71.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
71.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
70.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
70.7
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
70.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
69.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
69.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
68.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
68.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
65.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
65.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
64.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
64.1
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
63.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
61.7
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
60.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
60.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
59.9
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
59.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
59.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
59.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
58.7
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
57.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
57.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
56.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
56.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
56.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
56.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
55.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
53.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
53.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
53.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
52.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
52.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
51.3
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
50.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
49.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
48.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
47.8
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
47.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
47.5
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
45.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
44.5
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
44.3
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
43.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
43.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
40.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
39.5
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
39.4
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
38.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
38.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
38.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
38.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
33.2
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
27.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
25.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
23.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
22.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
21.6
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
18.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
13.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
13.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 63.4
Samples: 108
Max RPKM: 171.6
Min RPKM: 4.1
Std RPKM: 34.4
Median RPKM: 56.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
171.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
157.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
155.0
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
142.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
138.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
127.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
127.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
123.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
122.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
119.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
118.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
116.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
115.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
113.3
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
105.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
97.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
91.1
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
90.5
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
89.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
89.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
86.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
86.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
84.8
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
83.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
82.4
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
79.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
79.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
78.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
77.4
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
77.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
76.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
75.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
75.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
73.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
72.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
72.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
72.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
71.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
68.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
68.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
68.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
67.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
65.9
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
65.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
64.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
64.5
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
64.5
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
63.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
63.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
60.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
58.8
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
58.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
58.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
56.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
56.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
56.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
56.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
56.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
56.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
56.0
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
52.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
52.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
51.9
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
51.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
51.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
50.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
49.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
48.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
46.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
45.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
45.9
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
45.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
45.2
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
44.7
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
44.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
44.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
42.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
42.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
42.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
41.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
41.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
40.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
39.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
38.1
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
38.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
37.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
36.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
34.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
34.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
34.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
33.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
30.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
29.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
27.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
26.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
26.3
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
24.1
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
23.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
22.8
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
21.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
17.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
16.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
14.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
14.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
12.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
10.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
9.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
4.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.