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COLON - Expression summary
RNA expressioni
HPA:17.0TPM
GTEx:11.5RPKM
FANTOM5:28.7Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 17.0
overview Male, age 54 Sample 1
TPM: 18.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 14.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 18.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 18.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 14.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 17.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 21.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 11.5
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 10.4
Samples: 149

Max RPKM: 17.6
Min RPKM: 4.2
Std RPKM: 2.9
Median RPKM: 10.0
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 17.6
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 17.0
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 16.7
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 16.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 16.4
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 16.3
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 16.2
GTEX-145LS-2926-SM-5O99G 60-69 years, female 16.1
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 16.0
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 15.8
Show all
Colon - Transverse
RPKM: 12.2
Samples: 196

Max RPKM: 19.1
Min RPKM: 7.2
Std RPKM: 2.2
Median RPKM: 12.1
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 19.1
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 18.9
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 18.6
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 17.2
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 17.2
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 16.6
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 16.6
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 16.6
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 16.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 16.0
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 28.7
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 23.9
FF:10014-101C5 62,83,84 years, mixed 28.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.