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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 196.3
Min RPKM: 36.1
Std RPKM: 33.7
Median RPKM: 96.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
196.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
184.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
180.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
177.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
175.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
172.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
169.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
168.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
160.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
159.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
153.4
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
153.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
145.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
138.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
137.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
135.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
135.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
133.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
132.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
131.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
129.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
127.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
127.2
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
125.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
125.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
124.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
124.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
124.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
119.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
117.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
115.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
114.1
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
114.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
110.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
110.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
110.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
109.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
107.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
107.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
106.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
105.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
104.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
102.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
102.6
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
102.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
101.7
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
101.3
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
99.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
99.3
GTEX-QV31-0126-SM-447BP
30-39 years, male
99.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
99.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
98.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
95.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
95.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
94.1
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
93.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
91.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
91.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
91.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
91.3
GTEX-R55G-0226-SM-48FEI
40-49 years, female
91.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
90.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
90.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
90.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
89.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
89.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
87.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
86.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
85.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
83.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
82.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
81.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
78.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
78.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
78.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
77.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
75.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
74.5
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
74.0
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
73.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
73.2
GTEX-Q734-0226-SM-48U1A
40-49 years, female
71.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
71.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
70.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
69.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
69.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
69.0
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
68.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
67.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
67.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
66.8
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
65.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
65.3
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
65.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
64.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
64.3
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
63.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
63.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
63.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
62.4
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
60.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
53.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
50.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
36.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.