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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 266.7
Min RPKM: 111.8
Std RPKM: 28.5
Median RPKM: 186.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
266.7
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
247.2
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
244.4
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
242.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
240.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
239.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
233.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
230.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
229.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
228.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
228.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
223.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
222.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
222.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
222.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
221.3
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
219.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
217.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
214.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
210.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
210.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
210.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
209.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
209.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
208.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
207.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
207.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
206.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
205.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
203.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
203.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
203.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
199.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
199.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
197.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
196.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
195.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
195.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
194.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
194.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
193.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
193.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
193.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
192.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
191.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
190.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
189.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
189.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
189.2
GTEX-R55G-0226-SM-48FEI
40-49 years, female
188.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
188.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
187.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
185.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
185.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
184.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
184.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
183.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
183.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
183.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
183.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
182.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
181.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
180.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
179.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
177.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
175.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
174.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
174.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
173.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
173.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
173.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
172.5
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
171.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
171.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
170.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
170.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
169.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
168.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
167.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
166.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
166.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
166.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
165.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
165.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
163.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
163.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
163.1
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
161.2
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
161.0
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
160.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
158.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
157.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
155.6
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
155.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
152.1
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
151.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
147.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
144.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
141.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
141.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
139.0
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
132.4
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
125.7
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
111.8
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.