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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2380.3
Min RPKM: 907.9
Std RPKM: 313.2
Median RPKM: 1469.2
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
2380.3
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
2146.7
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
2107.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
2092.2
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
2060.5
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
2059.4
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
2046.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
2022.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1969.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1963.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1946.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1904.2
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1879.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1874.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1854.7
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1828.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1815.8
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1804.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1745.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1743.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1682.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1679.8
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1677.1
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1675.6
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1669.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1662.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1661.0
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1660.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1657.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1646.5
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1635.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1630.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1588.8
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1575.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1567.1
GTEX-11I78-1926-SM-59878
50-59 years, female
1550.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1545.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
1543.9
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1529.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1528.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1524.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1514.7
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1503.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1498.1
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1491.1
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1488.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1480.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1475.1
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1469.2
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1463.7
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1456.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1447.1
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1442.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1442.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1433.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1424.1
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1422.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1416.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1401.8
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1393.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1377.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
1369.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1367.0
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1365.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1359.4
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1343.0
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1326.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1319.9
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1271.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1270.5
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1264.3
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1263.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1255.7
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
1242.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1230.5
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1224.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
1209.5
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1193.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1180.5
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
1179.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1174.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
1165.2
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1162.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1148.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
1123.2
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1121.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1106.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1101.4
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
1080.8
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
1057.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1039.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
1026.9
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
1020.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1002.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
945.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
918.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
907.9
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.