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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 774.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 329.7
Min RPKM: 121.7
Std RPKM: 35.1
Median RPKM: 193.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
329.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
292.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
290.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
287.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
285.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
272.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
266.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
264.9
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
261.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
258.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
253.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
252.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
251.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
249.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
244.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
241.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
240.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
235.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
231.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
217.5
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
216.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
215.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
215.1
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
212.9
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
212.3
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
211.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
211.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
210.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
208.6
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
207.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
205.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
205.4
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
204.7
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
203.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
202.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
201.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
201.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
200.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
200.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
199.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
199.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
198.9
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
198.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
197.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
197.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
196.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
196.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
196.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
196.2
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
196.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
196.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
195.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
194.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
194.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
193.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
193.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
193.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
193.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
191.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
191.1
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
190.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
190.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
189.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
188.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
188.7
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
188.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
188.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
187.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
186.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
186.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
186.3
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
184.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
183.2
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
182.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
182.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
182.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
181.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
180.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
180.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
179.8
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
179.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
178.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
178.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
177.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
176.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
176.0
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
175.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
174.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
174.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
174.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
172.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
171.4
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
170.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
170.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
169.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
169.5
GTEX-1128S-2726-SM-5H12C
60-69 years, female
169.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
169.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
168.9
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
168.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
167.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
165.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
165.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
164.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
163.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
161.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
160.9
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
156.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
155.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
150.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
145.1
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
139.8
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
139.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
121.7
Show all
Brain - Frontal Cortex (BA9) RPKM: 201.5
Samples: 108
Max RPKM: 396.5
Min RPKM: 103.7
Std RPKM: 44.7
Median RPKM: 193.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
396.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
299.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
299.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
299.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
286.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
280.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
277.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
273.3
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
272.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
271.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
257.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
257.6
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
252.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
247.6
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
243.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
242.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
242.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
235.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
233.3
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
233.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
231.8
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
231.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
230.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
230.4
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
229.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
227.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
225.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
225.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
224.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
222.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
222.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
220.7
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
218.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
217.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
214.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
213.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
213.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
213.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
211.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
211.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
211.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
210.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
209.1
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
209.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
207.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
204.8
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
204.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
201.3
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
200.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
199.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
198.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
195.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
194.2
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
193.8
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
193.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
192.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
192.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
192.0
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
191.8
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
190.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
190.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
190.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
187.9
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
186.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
185.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
185.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
185.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
184.7
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
183.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
182.1
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
181.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
180.6
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
178.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
177.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
177.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
176.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
175.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
175.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
175.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
175.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
174.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
173.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
173.4
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
171.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
171.8
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
171.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
170.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
170.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
170.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
167.3
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
167.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
163.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
162.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
162.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
160.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
156.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
156.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
151.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
149.0
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
148.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
146.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
143.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
140.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
131.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
120.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
109.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
105.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
103.7
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.