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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 366.4
Min RPKM: 84.1
Std RPKM: 57.4
Median RPKM: 201.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
366.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
345.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
342.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
334.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
334.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
326.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
317.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
303.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
290.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
290.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
287.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
281.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
280.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
280.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
274.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
271.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
270.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
264.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
262.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
262.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
258.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
258.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
255.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
250.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
249.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
248.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
246.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
246.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
245.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
244.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
243.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
241.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
238.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
236.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
236.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
233.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
232.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
231.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
231.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
227.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
227.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
225.2
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
224.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
221.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
220.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
220.1
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
218.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
218.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
216.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
216.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
213.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
209.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
209.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
207.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
205.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
204.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
202.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
201.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
201.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
200.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
199.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
198.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
198.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
197.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
197.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
196.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
196.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
195.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
195.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
190.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
188.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
185.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
185.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
183.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
182.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
182.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
182.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
179.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
179.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
178.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
178.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
177.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
177.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
176.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
176.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
174.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
171.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
170.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
169.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
168.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
163.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
161.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
160.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
157.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
157.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
157.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
156.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
154.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
153.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
151.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
149.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
142.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
140.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
136.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
135.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
135.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
133.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
131.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
126.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
124.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
123.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
116.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
115.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
114.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
109.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
84.1
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
84.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.