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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2381
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2571.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3241.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1540.3
Min RPKM: 322.6
Std RPKM: 223.0
Median RPKM: 672.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1540.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1508.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1341.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1297.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1259.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1228.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1211.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1211.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1189.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1183.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1159.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1158.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1127.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1104.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1097.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1055.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1039.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1030.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
1028.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
1016.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1012.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
1000.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
993.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
992.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
977.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
974.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
969.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
966.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
961.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
939.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
935.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
928.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
908.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
903.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
902.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
888.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
884.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
873.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
870.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
860.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
845.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
841.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
835.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
833.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
826.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
822.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
820.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
819.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
819.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
818.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
815.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
812.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
812.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
811.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
810.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
809.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
808.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
807.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
807.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
804.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
800.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
799.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
796.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
791.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
791.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
791.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
789.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
785.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
785.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
784.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
784.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
782.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
782.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
776.6
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
776.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
774.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
772.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
771.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
767.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
765.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
765.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
762.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
761.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
757.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
742.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
742.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
740.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
738.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
736.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
732.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
728.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
727.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
726.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
722.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
717.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
716.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
714.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
711.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
709.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
701.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
697.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
694.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
682.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
680.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
678.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
676.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
674.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
671.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
667.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
666.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
659.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
657.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
656.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
654.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
650.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
649.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
648.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
646.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
640.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
635.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
629.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
628.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
626.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
624.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
623.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
623.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
621.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
620.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
620.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
618.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
614.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
607.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
605.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
604.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
596.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
596.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
591.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
590.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
589.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
589.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
585.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
585.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
576.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
575.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
575.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
574.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
571.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
571.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
568.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
567.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
567.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
566.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
555.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
551.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
547.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
547.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
546.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
545.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
536.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
532.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
530.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
528.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
528.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
528.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
521.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
521.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
513.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
511.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
511.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
509.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
506.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
505.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
504.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
503.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
502.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
501.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
499.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
498.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
493.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
492.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
485.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
484.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
481.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
478.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
473.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
471.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
466.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
465.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
464.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
459.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
458.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
455.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
453.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
453.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
446.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
443.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
443.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
440.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
431.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
427.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
426.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
422.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
411.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
409.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
409.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
400.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
393.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
391.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
390.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
384.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
370.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
360.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
351.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
322.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.