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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1881.8
Min RPKM: 110.9
Std RPKM: 282.0
Median RPKM: 490.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
1881.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
1279.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
1240.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
1082.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
1068.2
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
1059.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
1007.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
952.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
951.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
929.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
926.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
865.5
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
861.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
853.8
GTEX-13111-0126-SM-5EGHO
50-59 years, male
844.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
836.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
808.6
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
806.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
804.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
769.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
768.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
757.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
743.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
718.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
717.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
693.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
693.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
693.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
667.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
643.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
634.4
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
632.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
630.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
627.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
626.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
621.0
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
615.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
590.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
582.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
567.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
564.2
GTEX-Q734-0226-SM-48U1A
40-49 years, female
563.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
562.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
545.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
526.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
523.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
515.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
504.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
503.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
499.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
496.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
496.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
485.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
481.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
478.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
478.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
468.1
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
461.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
460.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
444.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
442.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
438.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
430.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
427.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
425.8
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
425.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
420.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
418.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
413.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
409.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
403.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
380.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
380.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
380.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
377.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
376.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
375.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
370.3
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
362.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
361.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
360.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
341.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
338.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
333.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
316.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
307.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
305.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
295.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
274.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
268.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
253.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
242.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
241.9
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
231.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
228.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
218.8
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
204.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
194.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
187.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
184.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
173.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
161.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
140.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
110.9
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.