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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 752.0
Min RPKM: 9.8
Std RPKM: 163.9
Median RPKM: 174.0
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
752.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
698.2
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
668.3
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
598.4
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
578.9
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
541.3
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
529.5
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
517.0
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
461.6
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
446.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
437.6
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
426.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
420.0
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
412.5
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
402.4
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
388.5
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
379.0
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
340.0
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
336.5
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
323.5
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
302.2
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
301.7
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
295.5
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
289.3
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
285.9
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
283.2
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
283.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
272.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
268.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
265.1
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
264.1
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
263.0
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
254.4
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
253.4
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
252.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
247.4
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
221.9
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
220.2
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
215.7
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
213.8
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
212.4
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
210.6
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
209.2
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
194.7
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
189.8
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
189.8
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
179.3
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
175.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
172.6
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
164.7
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
158.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
152.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
151.1
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
147.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
147.1
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
143.1
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
139.6
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
138.0
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
133.6
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
131.1
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
130.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
123.3
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
121.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
120.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
119.9
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
116.6
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
112.3
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
111.3
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
111.3
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
110.2
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
106.4
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
100.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
100.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
79.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
78.6
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
78.4
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
77.8
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
73.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
72.1
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
71.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
70.5
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
67.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
65.7
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
65.5
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
64.7
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
58.8
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
54.9
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
54.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
52.5
GTEX-11I78-2026-SM-5987C
50-59 years, female
43.0
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
30.8
GTEX-S341-1226-SM-4AD5S
40-49 years, female
29.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
21.4
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
20.7
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
16.7
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
9.8
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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