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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 302.6
Min RPKM: 153.6
Std RPKM: 31.3
Median RPKM: 213.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
302.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
296.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
290.8
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
276.9
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
270.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
266.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
264.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
264.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
263.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
262.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
262.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
260.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
259.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
258.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
252.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
251.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
249.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
249.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
248.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
245.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
244.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
240.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
238.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
236.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
235.6
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
235.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
234.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
233.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
233.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
232.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
229.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
229.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
228.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
227.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
226.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
225.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
224.6
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
223.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
223.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
222.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
222.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
221.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
221.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
219.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
218.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
218.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
217.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
215.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
214.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
214.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
214.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
214.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
213.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
212.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
211.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
210.1
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
209.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
208.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
208.3
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
208.1
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
207.9
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
206.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
206.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
206.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
206.3
GTEX-QLQW-0126-SM-447BK
30-39 years, male
205.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
205.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
204.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
202.3
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
201.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
201.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
200.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
198.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
196.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
194.3
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
192.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
191.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
190.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
190.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
188.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
187.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
187.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
187.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
186.2
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
185.9
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
185.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
185.3
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
184.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
183.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
183.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
181.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
180.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
179.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
179.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
177.3
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
176.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
176.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
174.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
172.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
170.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
166.2
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
160.3
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
158.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
153.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.