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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 411.5
Min RPKM: 133.1
Std RPKM: 59.3
Median RPKM: 247.1
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
411.5
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
399.1
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
383.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
364.6
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
350.3
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
349.1
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
348.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
347.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
344.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
338.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
334.0
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
332.4
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
332.0
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
330.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
328.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
324.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
321.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
317.2
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
315.0
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
306.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
302.5
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
299.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
298.3
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
297.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
294.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
293.8
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
290.3
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
289.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
288.0
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
287.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
285.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
275.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
274.0
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
272.6
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
272.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
271.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
269.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
267.3
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
260.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
259.3
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
257.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
257.4
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
256.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
256.1
GTEX-P78B-1926-SM-3P616
40-49 years, female
252.9
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
248.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
248.5
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
248.1
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
247.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
244.3
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
243.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
242.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
242.6
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
238.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
237.6
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
237.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
236.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
234.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
234.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
233.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
233.7
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
233.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
230.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
229.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
229.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
227.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
224.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
223.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
221.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
219.1
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
213.0
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
212.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
210.5
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
209.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
208.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
208.3
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
208.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
203.6
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
202.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
200.7
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
200.6
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
198.3
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
196.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
195.8
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
194.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
192.6
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
191.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
181.8
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
179.7
GTEX-11I78-1926-SM-59878
50-59 years, female
176.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
170.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
166.8
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
163.7
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
153.7
GTEX-QCQG-1426-SM-48U22
50-59 years, female
146.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
134.6
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
133.1
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.