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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 523.9
Min RPKM: 41.8
Std RPKM: 69.6
Median RPKM: 150.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
523.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
363.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
356.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
339.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
276.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
267.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
256.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
255.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
255.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
242.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
233.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
230.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
228.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
228.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
227.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
225.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
218.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
215.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
208.3
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
204.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
203.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
203.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
202.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
198.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
195.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
194.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
194.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
192.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
188.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
187.4
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
183.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
182.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
178.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
176.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
175.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
173.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
172.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
171.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
169.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
169.2
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
167.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
166.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
157.8
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
154.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
154.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
151.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
151.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
151.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
150.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
150.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
150.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
150.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
149.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
148.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
147.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
146.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
146.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
144.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
142.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
140.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
139.7
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
139.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
138.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
136.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
136.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
136.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
132.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
132.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
130.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
127.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
127.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
127.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
126.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
124.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
124.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
123.9
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
123.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
123.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
119.9
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
119.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
111.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
110.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
109.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
107.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
107.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
106.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
104.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
101.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
100.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
100.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
93.6
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
92.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
90.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
89.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
88.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
83.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
83.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
81.7
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
81.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
78.1
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
69.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
67.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
63.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
41.8
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.