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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 440.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 201.0
Min RPKM: 30.4
Std RPKM: 28.3
Median RPKM: 98.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
201.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
177.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
163.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
158.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
152.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
149.0
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
147.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
143.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
143.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
142.0
GTEX-X585-3026-SM-46MWF
50-59 years, male
141.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
138.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
138.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
134.1
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
133.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
132.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
128.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
128.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
124.7
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
123.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
121.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
121.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
121.0
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
120.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
120.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
120.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
119.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
119.5
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
119.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
118.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
117.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
116.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
113.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
113.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
111.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
110.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
110.3
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
108.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
108.6
GTEX-11PRG-2926-SM-5987A
50-59 years, male
108.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
107.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
106.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
106.6
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
106.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
105.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
105.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
105.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
104.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
104.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
103.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
101.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
101.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
101.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
100.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
99.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
98.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
98.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
97.5
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
97.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
96.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
96.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
94.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
94.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
94.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
94.0
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
93.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
92.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
92.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
91.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
90.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
89.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
89.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
89.6
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
89.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
87.9
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
87.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
86.9
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
86.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
86.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
85.8
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
85.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
84.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
84.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
84.4
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
84.3
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
84.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
84.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
83.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
83.0
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
80.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
80.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
79.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
78.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
77.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
77.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
76.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
76.5
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
75.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
75.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
75.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
74.8
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
73.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
73.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
72.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
71.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
67.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
59.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
58.3
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
57.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
49.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
44.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
41.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
30.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
30.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 113.6
Samples: 108
Max RPKM: 226.6
Min RPKM: 34.5
Std RPKM: 33.8
Median RPKM: 112.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
226.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
200.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
181.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
179.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
171.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
169.7
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
169.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
169.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
168.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
163.4
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
159.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
156.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
154.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
153.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
153.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
153.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
152.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
149.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
149.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
139.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
138.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
137.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
136.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
131.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
131.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
130.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
129.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
128.3
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
127.5
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
127.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
126.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
125.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
125.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
125.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
125.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
124.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
124.4
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
124.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
124.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
122.9
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
121.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
120.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
120.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
119.6
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
119.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
118.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
118.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
118.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
118.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
118.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
115.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
115.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
114.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
112.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
111.8
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
111.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
111.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
111.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
110.7
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
110.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
108.8
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
107.8
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
106.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
106.7
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
104.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
103.1
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
102.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
101.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
101.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
101.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
101.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
100.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
99.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
99.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
98.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
96.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
96.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
96.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
94.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
90.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
88.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
87.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
86.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
85.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
84.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
84.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
83.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
83.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
83.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
83.1
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
83.0
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
82.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
80.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
79.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
77.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
73.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
71.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
71.5
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
70.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
68.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
68.8
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
68.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
67.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
61.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
50.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
47.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
38.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
34.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.